STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pabpc4lpoly(A) binding protein, cytoplasmic 4-like. (370 aa)    
Predicted Functional Partners:
Pan3
PAN3 poly(A) specific ribonuclease subunit.
    
 0.920
Pan2
PAN2 poly(A) specific ribonuclease subunit.
    
 0.914
Ncbp2
Nuclear cap binding protein subunit 2.
   
 0.886
ENSJJAP00000007403
annotation not available
   
 0.855
ENSJJAP00000008185
annotation not available
   
 0.855
ENSJJAP00000021754
annotation not available
   
 0.855
ENSJJAP00000022897
annotation not available
   
 0.855
ENSJJAP00000023983
annotation not available
   
 0.855
Gspt2
G1 to S phase transition 2.
   
 0.843
Upf1
UPF1 regulator of nonsense transcripts homolog (yeast).
    
 0.835
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.