STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zc3h12aZinc finger CCCH type containing 12A. (598 aa)    
Predicted Functional Partners:
Ikbkg
Inhibitor of kappaB kinase gamma.
    
 0.739
Tank
TRAF family member-associated Nf-kappa B activator.
   
 
 0.705
Casp8
Caspase 8.
     
 0.612
Nedd8
Neural precursor cell expressed, developmentally down-regulated gene 8.
    
   0.576
Nfkbiz
Nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta.
   
 
 0.530
Rc3h1
RING CCCH (C3H) domains 1.
      
 0.527
ENSJJAP00000007697
annotation not available
   
 
 0.512
ENSJJAP00000019886
annotation not available
   
 
 0.511
Tm2d3
TM2 domain containing 3.
      
 0.508
Traf6
TNF receptor-associated factor 6.
    
 
 0.472
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.