STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D16Ertd472eDNA segment, Chr 16, ERATO Doi 472, expressed. (283 aa)    
Predicted Functional Partners:
Neurl1a
Neuralized E3 ubiquitin protein ligase 1A.
      
 0.570
Neurl1b
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.570
Rlf
Rearranged L-myc fusion sequence.
      
 0.520
Ufc1
Ubiquitin-fold modifier conjugating enzyme 1.
      
 0.465
Otud7a
OTU domain containing 7A.
      
 0.456
Adgrb2
Adhesion G protein-coupled receptor B2.
      
 0.456
Klhl7
Kelch-like 7.
      
 0.456
Uap1
UDP-N-acetylglucosamine pyrophosphorylase 1.
      
 0.456
Zfp292
Zinc finger protein 292.
      
 0.450
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.