STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam45aFamily with sequence similarity 45, member A. (338 aa)    
Predicted Functional Partners:
Nme8
NME/NM23 family member 8.
  
 0.924
Srxn1
Sulfiredoxin 1 homolog (S. cerevisiae).
   
 0.923
Ccdc22
Coiled-coil domain containing 22.
    
 
 0.887
Ccdc93
Coiled-coil domain containing 93.
    
 
 0.866
ENSJJAP00000015590
annotation not available
   
 0.866
Eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 0.866
Vps26c
VPS26 endosomal protein sorting factor C.
    
 
 0.859
Txndc8
Thioredoxin domain containing 8.
  
 0.854
Txn1
Thioredoxin 1.
  
 0.854
Commd3
COMM domain containing 3.
    
 
 0.844
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.