STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpe65Retinal pigment epithelium 65. (533 aa)    
Predicted Functional Partners:
Lrat
Lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase).
     
 0.928
Rdh11
Retinol dehydrogenase 11.
   
 
 0.881
Rdh10
Retinol dehydrogenase 10 (all-trans).
     
 0.874
Rdh12
Retinol dehydrogenase 12.
   
 
 0.866
Dgat1
Diacylglycerol O-acyltransferase 1.
   
 
 0.865
Sdr9c7
4short chain dehydrogenase/reductase family 9C, member 7.
   
 
 0.847
Awat2
acyl-CoA wax alcohol acyltransferase 2.
   
 
 0.843
Fdft1
Farnesyl diphosphate farnesyl transferase 1.
    
 0.783
Ccnb1
Cyclin B1.
   
  
 0.769
Ccnb2
Cyclin B2.
   
  
 0.769
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.