STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdc40Cell division cycle 40. (579 aa)    
Predicted Functional Partners:
Slu7
SLU7 splicing factor homolog (S. cerevisiae).
   
 0.999
Syf2
SYF2 homolog, RNA splicing factor (S. cerevisiae).
    
 0.999
Dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.999
ENSJJAP00000014627
annotation not available
   
 0.999
Cwc25
CWC25 spliceosome-associated protein.
    
 0.998
Ccdc12
Coiled-coil domain containing 12.
    
  0.998
Ppil1
Peptidylprolyl isomerase (cyclophilin)-like 1.
    
 0.998
Yju2
YJU2 splicing factor.
    
 0.998
Dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
   
 0.996
Dhx15
DEAH (Asp-Glu-Ala-His) box polypeptide 15.
    
 0.996
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.