STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000003492annotation not available (126 aa)    
Predicted Functional Partners:
ENSJJAP00000002803
annotation not available
 
      0.899
Vgll4
Vestigial like family member 4.
    
 
 0.852
ENSJJAP00000000018
annotation not available
    
 0.626
Itch
Itchy, E3 ubiquitin protein ligase.
    
 0.626
ENSJJAP00000000417
annotation not available
    
 0.626
ENSJJAP00000002183
annotation not available
    
 0.626
ENSJJAP00000005506
annotation not available
    
 0.626
Plekha5
Pleckstrin homology domain containing, family A member 5.
    
 0.626
Hecw1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
    
 0.626
Smurf1
SMAD specific E3 ubiquitin protein ligase 1.
    
 0.626
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.