STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rrn3RRN3 RNA polymerase I transcription factor homolog (yeast). (649 aa)    
Predicted Functional Partners:
Twistnb
Twist basic helix-loop-helix transcription factor 1 neighbor.
   
 0.999
Polr1b
Polymerase (RNA) I polypeptide B.
   
 0.998
Polr1a
Polymerase (RNA) I polypeptide A.
   
 0.998
Polr1e
Polymerase (RNA) I polypeptide E.
   
 0.997
Polr1c
Polymerase (RNA) I polypeptide C.
   
 0.997
Polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 0.995
Polr2h
Polymerase (RNA) II (DNA directed) polypeptide H.
    
 0.995
Cd3eap
CD3E antigen, epsilon polypeptide associated protein.
   
 0.993
Polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.989
Polr3b
Polymerase (RNA) III (DNA directed) polypeptide B.
   
 0.983
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.