STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phf6PHD finger protein 6. (365 aa)    
Predicted Functional Partners:
Rbbp5
Retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.881
Rbbp4
Retinoblastoma binding protein 4, chromatin remodeling factor.
   
 0.875
ENSJJAP00000010066
annotation not available
   
 0.867
Rbbp7
Retinoblastoma binding protein 7, chromatin remodeling factor.
   
 0.866
Eed
Embryonic ectoderm development.
   
 0.802
ENSJJAP00000007051
annotation not available
    
 0.794
ENSJJAP00000007796
annotation not available
    
 0.794
Suz12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.794
ENSJJAP00000018369
annotation not available
  
 0.793
Prdm5
PR domain containing 5.
   
 0.747
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.