STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aarsalanyl-tRNA synthetase. (968 aa)    
Predicted Functional Partners:
Cdc16
CDC16 cell division cycle 16.
   
 0.988
ENSJJAP00000023227
annotation not available
   
 0.988
ENSJJAP00000003306
annotation not available
   
 0.987
Hspb11
Heat shock protein family B (small), member 11.
    
 0.987
Anapc5
Anaphase-promoting complex subunit 5.
   
 0.987
Anapc2
Anaphase promoting complex subunit 2.
    
 0.987
Anapc7
Anaphase promoting complex subunit 7.
   
 0.979
Anapc13
Anaphase promoting complex subunit 13.
    
 0.972
ENSJJAP00000018673
annotation not available
    
 0.961
Mad2l1
MAD2 mitotic arrest deficient-like 1.
    
 0.958
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.