STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arhgef12Rho guanine nucleotide exchange factor (GEF) 12. (1537 aa)    
Predicted Functional Partners:
ENSJJAP00000002221
annotation not available
   
 0.983
ENSJJAP00000013589
annotation not available
   
 0.983
Gna13
Guanine nucleotide binding protein, alpha 13.
    
 0.978
Gna12
Guanine nucleotide binding protein, alpha 12.
    
 0.975
Plxnb1
Plexin B1.
    
 0.961
ENSJJAP00000004587
annotation not available
    
 0.959
Plxnb3
Plexin B3.
    
 0.950
Rhoc
Ras homolog family member C.
   
 0.931
Rhob
Ras homolog family member B.
   
 0.931
ENSJJAP00000024624
annotation not available
    
 0.925
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.