STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Shroom3Shroom family member 3. (1936 aa)    
Predicted Functional Partners:
Sfn
Stratifin.
    
   0.921
Actl6a
Actin-like 6A.
   
 0.778
Actr8
ARP8 actin-related protein 8.
    
 0.759
Ruvbl1
RuvB-like protein 1.
    
 0.719
Actr5
ARP5 actin-related protein 5.
    
 0.709
Rock2
Rho-associated coiled-coil containing protein kinase 2.
   
 
 0.709
Ercc3
Excision repair cross-complementing rodent repair deficiency, complementation group 3.
   
 0.709
Polrmt
Polymerase (RNA) mitochondrial (DNA directed).
    
 0.694
Gtf2h3
General transcription factor IIH, polypeptide 3.
    
 0.689
Dusp11
Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).
     
 0.684
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.