STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tubb6Tubulin, beta 6 class V. (446 aa)    
Predicted Functional Partners:
Tuba4a
Tubulin, alpha 4A.
  
0.971
Tuba8
Tubulin, alpha 8.
  
0.966
ENSJJAP00000014598
annotation not available
  
0.958
ENSJJAP00000016851
annotation not available
    
 0.942
Wdr90
WD repeat domain 90.
   
 0.940
ENSJJAP00000010234
annotation not available
  
0.936
Tuba1b
Tubulin, alpha 1B.
  
0.935
Tuba1c
Tubulin, alpha 1C.
  
0.935
Dync1i1
Dynein cytoplasmic 1 intermediate chain 1.
   
 0.908
Dync1i2
Dynein cytoplasmic 1 intermediate chain 2.
    
 0.905
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.