Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Med1 | Med13 | ENSJJAP00000001563 | ENSJJAP00000005033 | Mediator complex subunit 1. | Mediator complex subunit 13. | 0.997 |
Med1 | Ncoa1 | ENSJJAP00000001563 | ENSJJAP00000000790 | Mediator complex subunit 1. | Nuclear receptor coactivator 1. | 0.882 |
Med1 | Ncoa2 | ENSJJAP00000001563 | ENSJJAP00000018943 | Mediator complex subunit 1. | Nuclear receptor coactivator 2. | 0.862 |
Med1 | Ncoa3 | ENSJJAP00000001563 | ENSJJAP00000004582 | Mediator complex subunit 1. | Nuclear receptor coactivator 3. | 0.902 |
Med1 | Ncor2 | ENSJJAP00000001563 | ENSJJAP00000014875 | Mediator complex subunit 1. | Nuclear receptor co-repressor 2. | 0.782 |
Med1 | Nr1d2 | ENSJJAP00000001563 | ENSJJAP00000008998 | Mediator complex subunit 1. | Nuclear receptor subfamily 1, group D, member 2. | 0.920 |
Med1 | Nr1i3 | ENSJJAP00000001563 | ENSJJAP00000004864 | Mediator complex subunit 1. | Nuclear receptor subfamily 1, group I, member 3. | 0.851 |
Med1 | Rxra | ENSJJAP00000001563 | ENSJJAP00000022771 | Mediator complex subunit 1. | Retinoid X receptor alpha. | 0.994 |
Med1 | Rxrb | ENSJJAP00000001563 | ENSJJAP00000002646 | Mediator complex subunit 1. | Retinoid X receptor beta. | 0.966 |
Med1 | Rxrg | ENSJJAP00000001563 | ENSJJAP00000013645 | Mediator complex subunit 1. | Retinoid X receptor gamma. | 0.970 |
Med13 | Med1 | ENSJJAP00000005033 | ENSJJAP00000001563 | Mediator complex subunit 13. | Mediator complex subunit 1. | 0.997 |
Med13 | Nr1d2 | ENSJJAP00000005033 | ENSJJAP00000008998 | Mediator complex subunit 13. | Nuclear receptor subfamily 1, group D, member 2. | 0.696 |
Med13 | Nr1i3 | ENSJJAP00000005033 | ENSJJAP00000004864 | Mediator complex subunit 13. | Nuclear receptor subfamily 1, group I, member 3. | 0.725 |
Med13 | Rxra | ENSJJAP00000005033 | ENSJJAP00000022771 | Mediator complex subunit 13. | Retinoid X receptor alpha. | 0.875 |
Med13 | Rxrb | ENSJJAP00000005033 | ENSJJAP00000002646 | Mediator complex subunit 13. | Retinoid X receptor beta. | 0.874 |
Med13 | Rxrg | ENSJJAP00000005033 | ENSJJAP00000013645 | Mediator complex subunit 13. | Retinoid X receptor gamma. | 0.875 |
Ncoa1 | Med1 | ENSJJAP00000000790 | ENSJJAP00000001563 | Nuclear receptor coactivator 1. | Mediator complex subunit 1. | 0.882 |
Ncoa1 | Ncoa2 | ENSJJAP00000000790 | ENSJJAP00000018943 | Nuclear receptor coactivator 1. | Nuclear receptor coactivator 2. | 0.978 |
Ncoa1 | Ncoa3 | ENSJJAP00000000790 | ENSJJAP00000004582 | Nuclear receptor coactivator 1. | Nuclear receptor coactivator 3. | 0.958 |
Ncoa1 | Ncor2 | ENSJJAP00000000790 | ENSJJAP00000014875 | Nuclear receptor coactivator 1. | Nuclear receptor co-repressor 2. | 0.780 |
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