STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000005463annotation not available (283 aa)    
Predicted Functional Partners:
ENSJJAP00000020350
annotation not available
 
      0.837
Smg5
Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans).
   
    0.614
U2af2
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2.
   
 
 0.485
Scaf1
SR-related CTD-associated factor 1.
   
  
0.475
Dnmt1
DNA methyltransferase (cytosine-5) 1.
    
 
 0.461
Snrnp35
Small nuclear ribonucleoprotein 35 (U11/U12).
   
 
 0.406
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.