STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000005731annotation not available (374 aa)    
Predicted Functional Partners:
Pnn
Pinin.
   
 
 0.954
Srsf11
Serine/arginine-rich splicing factor 11.
   
 
 0.937
ENSJJAP00000006614
annotation not available
   
  
 0.923
ENSJJAP00000021164
annotation not available
   
  
 0.923
Mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.918
Smarcb1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.917
Actl6a
Actin-like 6A.
    
 0.915
Pbrm1
Polybromo 1.
    
 0.910
Prpf39
pre-mRNA processing factor 39.
   
  
 0.903
ENSJJAP00000022172
annotation not available
 
      0.900
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.