STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Col11a2Collagen, type XI, alpha 2. (1635 aa)    
Predicted Functional Partners:
ENSJJAP00000011957
annotation not available
    
 0.839
Col5a2
Collagen, type V, alpha 2.
  
0.821
Col2a1
Collagen, type II, alpha 1.
  
0.799
Pcolce
Procollagen C-endopeptidase enhancer protein.
   
 0.778
Mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.695
Col6a2
Collagen, type VI, alpha 2.
   
0.684
H2-Eb1
Histocompatibility 2, class II antigen E beta.
    
 0.633
Tep1
Telomerase associated protein 1.
    
 0.618
Col6a1
Collagen, type VI, alpha 1.
   
0.614
Col1a2
Collagen, type I, alpha 2.
  
0.610
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.