STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000006005annotation not available (1389 aa)    
Predicted Functional Partners:
Pcdh15
Protocadherin 15.
   
0.978
Ush1c
USH1 protein network component harmonin.
   
 
 0.961
ENSJJAP00000011373
annotation not available
   
0.955
Cdhr5
Cadherin-related family member 5.
   
 0.882
Ctnnb1
Catenin (cadherin associated protein), beta 1.
    
 0.845
Jup
Junction plakoglobin.
    
 0.845
Ctnna3
Catenin (cadherin associated protein), alpha 3.
    
 0.685
Ctnna1
Catenin (cadherin associated protein), alpha 1.
    
 0.685
Ctnna2
Catenin (cadherin associated protein), alpha 2.
    
 0.685
Pkp4
Plakophilin 4.
    
 0.679
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.