STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cir1Corepressor interacting with RBPJ, 1. (430 aa)    
Predicted Functional Partners:
Cwc25
CWC25 spliceosome-associated protein.
   
 
 0.946
Snw1
SNW domain containing 1.
   
 
 0.944
Rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.935
Sap30
Sin3 associated polypeptide.
    
 0.930
Sap30l
SAP30-like.
    
 0.913
Ncor2
Nuclear receptor co-repressor 2.
    
 0.898
Dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 
 0.894
Hdac2
Histone deacetylase 2.
    
 0.883
ENSJJAP00000006259
annotation not available
    
 0.873
Prpf8
pre-mRNA processing factor 8.
    
 
 0.844
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.