STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nod1Nucleotide-binding oligomerization domain containing 1. (955 aa)    
Predicted Functional Partners:
Ripk2
Receptor (TNFRSF)-interacting serine-threonine kinase 2.
   
 0.985
ENSJJAP00000008422
annotation not available
    
 0.953
Atg16l1
Autophagy related 16-like 1 (S. cerevisiae).
    
 0.950
ENSJJAP00000003013
annotation not available
    
  0.947
Sugt1
SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae).
    
 0.928
Mavs
Mitochondrial antiviral signaling protein.
    
 0.897
Nod2
Nucleotide-binding oligomerization domain containing 2.
   
0.864
Pycard
PYD and CARD domain containing.
   
 0.861
Atg5
Autophagy related 5.
     
 0.850
Atg16l2
Autophagy related 16-like 2 (S. cerevisiae).
    
 0.849
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.