STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pate3Prostate and testis expressed 3. (97 aa)    
Predicted Functional Partners:
Pate1
Prostate and testis expressed 1.
   
  
 0.723
Glb1l
Galactosidase, beta 1-like.
      
 0.552
Pate2
Prostate and testis expressed 2.
      
 0.542
Glb1l2
Galactosidase, beta 1-like 2.
      
 0.531
Pate10
Prostate and testis expressed 10.
      
 0.508
ENSJJAP00000018115
annotation not available
      
 0.456
Add1
Adducin 1 (alpha).
      
 0.455
Ly6l
Lymphocyte antigen 6 complex, locus L.
      
 0.446
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.