STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zfp213Zinc finger protein 213. (450 aa)    
Predicted Functional Partners:
ENSJJAP00000011957
annotation not available
    
  0.757
Zscan20
Zinc finger and SCAN domains 20.
  
 
  
0.755
ENSJJAP00000002180
annotation not available
    
  
0.646
Zscan22
Zinc finger and SCAN domain containing 22.
  
  
0.641
Zfp397
Zinc finger protein 397.
  
  
0.638
Ccdc105
Coiled-coil domain containing 105.
    
 0.600
Trim28
Tripartite motif-containing 28.
    
  0.562
ENSJJAP00000001398
annotation not available
    
  0.530
Nme8
NME/NM23 family member 8.
    
 0.529
ENSJJAP00000012215
annotation not available
    
 0.510
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.