STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Herc1HECT and RLD domain containing E3 ubiquitin protein ligase family member 1. (4860 aa)    
Predicted Functional Partners:
ENSJJAP00000011975
annotation not available
   
 0.872
Mycbp2
MYC binding protein 2, E3 ubiquitin protein ligase.
   
 
0.845
4932438A13Rik
RIKEN cDNA 4932438A13 gene.
   
   0.819
Ranbp2
RAN binding protein 2.
   
 0.763
Pias4
Protein inhibitor of activated STAT 4.
    
 0.762
Neurl4
Neuralized E3 ubiquitin protein ligase 4.
    
 
 0.759
Dock10
Dedicator of cytokinesis 10.
    
   0.746
Birc6
Baculoviral IAP repeat-containing 6.
   
 0.731
Trp53
Transformation related protein 53.
   
 
 0.727
Brca1
Breast cancer 1, early onset.
    
 0.726
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.