STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zcchc8Zinc finger, CCHC domain containing 8. (420 aa)    
Predicted Functional Partners:
Mtrex
Mtr4 exosome RNA helicase.
    
 
 0.982
ENSJJAP00000007410
annotation not available
    
 
 0.973
ENSJJAP00000013953
annotation not available
    
 
 0.973
Ncbp2
Nuclear cap binding protein subunit 2.
    
 
 0.852
Exosc7
Exosome component 7.
   
 
 0.821
Exosc1
Exosome component 1.
    
 
 0.783
ENSJJAP00000005042
annotation not available
    
 
 0.771
ENSJJAP00000022812
annotation not available
    
 
 0.771
Exosc5
Exosome component 5.
    
 
 0.734
ENSJJAP00000000348
annotation not available
    
 
 0.692
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.