STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrrc51Leucine rich repeat containing 51. (192 aa)    
Predicted Functional Partners:
Snrpd3
Small nuclear ribonucleoprotein D3.
   
 0.985
Snrpd2
Small nuclear ribonucleoprotein D2.
   
 0.984
Sf3a3
Splicing factor 3a, subunit 3.
   
 0.983
Sf3b1
Splicing factor 3b, subunit 1.
   
 0.980
Sf3b3
Splicing factor 3b, subunit 3.
    
 0.979
Snrpd1
Small nuclear ribonucleoprotein D1.
   
 0.978
Sf3a1
Splicing factor 3a, subunit 1.
   
 0.978
Sf3b2
Splicing factor 3b, subunit 2.
   
 0.976
Sf3b4
Splicing factor 3b, subunit 4.
    
 0.975
Sf3a2
Splicing factor 3a, subunit 2.
    
 0.974
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.