STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nipsnap3bNipsnap homolog 3B. (247 aa)    
Predicted Functional Partners:
Mthfsd
Methenyltetrahydrofolate synthetase domain containing.
   
    0.776
Wdr6
WD repeat domain 6.
   
    0.674
Npas4
Neuronal PAS domain protein 4.
   
    0.638
Vcp
Valosin containing protein.
   
  0.594
Spata5
Spermatogenesis associated 5.
   
  0.594
Smc1a
Structural maintenance of chromosomes 1A.
   
    0.587
Smc1b
Structural maintenance of chromosomes 1B.
   
    0.587
Asf1a
Anti-silencing function 1A histone chaperone.
   
    0.585
Asf1b
Anti-silencing function 1B histone chaperone.
   
    0.585
ENSJJAP00000000468
annotation not available
   
    0.581
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.