STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nif3l1Ngg1 interacting factor 3-like 1 (S. pombe). (376 aa)    
Predicted Functional Partners:
Gch1
GTP cyclohydrolase 1.
    
 0.924
Pts
6-pyruvoyl-tetrahydropterin synthase.
    
 0.891
Nudt15
Nudix (nucleoside diphosphate linked moiety X)-type motif 15.
    
  0.863
Hddc3
HD domain containing 3.
  
 
  0.858
Mocs1
Molybdenum cofactor synthesis 1.
    
  0.850
Rrm1
Ribonucleotide reductase M1.
  
 
  0.812
Pklr
Pyruvate kinase liver and red blood cell.
   
 0.809
Gpn1
GPN-loop GTPase 1.
   
    0.806
Aadat
Aminoadipate aminotransferase.
  
    0.776
ENSJJAP00000002611
annotation not available
   
 0.737
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.