STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000008400annotation not available (856 aa)    
Predicted Functional Partners:
ENSJJAP00000008422
annotation not available
    
 0.841
Sart3
Squamous cell carcinoma antigen recognized by T cells 3.
    
 
 0.830
ENSJJAP00000003013
annotation not available
    
  0.728
Traf6
TNF receptor-associated factor 6.
    
 0.711
Smurf2
SMAD specific E3 ubiquitin protein ligase 2.
    
 0.702
Tgfbr1
Transforming growth factor, beta receptor I.
    
 0.655
Smad7
SMAD family member 7.
    
 0.649
Rnf123
Ring finger protein 123.
   
 0.627
Usp4
Ubiquitin specific peptidase 4 (proto-oncogene).
  
 
 
0.589
Mrps16
Mitochondrial ribosomal protein S16.
    
 
 0.577
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.