STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csnk2a1Casein kinase 2, alpha 1 polypeptide. (391 aa)    
Predicted Functional Partners:
ENSJJAP00000009757
annotation not available
   
 0.995
ENSJJAP00000022850
annotation not available
   
 0.995
Supt16
SPT16, facilitates chromatin remodeling subunit.
   
 0.993
Rrp7a
Ribosomal RNA processing 7 homolog A (S. cerevisiae).
   
 0.988
Nol6
Nucleolar protein family 6 (RNA-associated).
    
 0.986
Ssrp1
Structure specific recognition protein 1.
    
 0.957
Pinx1
PIN2/TERF1 interacting, telomerase inhibitor 1.
    
 
 0.956
Rrp36
Ribosomal RNA processing 36 homolog (S. cerevisiae).
    
  0.956
Ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.955
Esf1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
 
 0.955
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.