STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vopp1Vesicular, overexpressed in cancer, prosurvival protein 1. (171 aa)    
Predicted Functional Partners:
Cyyr1
Cysteine and tyrosine-rich protein 1.
      
 0.570
Shisa3
Shisa family member 3.
      
 0.567
Tmem207
Transmembrane protein 207.
      
 0.567
AW209491
Expressed sequence AW209491.
      
 0.532
Wbp1
WW domain binding protein 1.
      
 0.497
Lancl2
LanC (bacterial lantibiotic synthetase component C)-like 2.
      
 0.493
Sec61g
SEC61, gamma subunit.
      
 0.467
Shisal1
Shisa like 1.
      
 0.457
E130309D02Rik
RIKEN cDNA E130309D02 gene.
      
 0.456
ENSJJAP00000007762
annotation not available
      
 0.449
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.