STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cul9Cullin 9. (2518 aa)    
Predicted Functional Partners:
Rbx1
Ring-box 1.
    
 0.978
Cul7
Cullin 7.
  
0.963
Trp53
Transformation related protein 53.
   
 
 0.956
Nedd8
Neural precursor cell expressed, developmentally down-regulated gene 8.
    
 0.829
ENSJJAP00000003013
annotation not available
    
  0.797
ENSJJAP00000014638
annotation not available
    
 0.774
ENSJJAP00000008422
annotation not available
    
 0.742
ENSJJAP00000009059
annotation not available
    
 0.724
Birc6
Baculoviral IAP repeat-containing 6.
    
 0.713
Trip12
Thyroid hormone receptor interactor 12.
   
 
 0.711
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.