STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nhlh1Nescient helix loop helix 1. (135 aa)    
Predicted Functional Partners:
Tcf3
Transcription factor 3.
    
 0.720
Ldb1
LIM domain binding 1.
    
 0.715
Ldb2
LIM domain binding 2.
    
 0.710
Tcf12
Transcription factor 12.
    
 0.709
Tcf4
Transcription factor 4.
    
 0.709
Lmo1
LIM domain only 1.
    
 0.637
Gsc
Goosecoid homeobox.
    
 0.600
Lmo2
LIM domain only 2.
    
 0.588
Lhx9
LIM homeobox protein 9.
   
 0.561
Uncx
UNC homeobox.
   
 0.529
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.