STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scn2aSodium channel, voltage-gated, type II, alpha. (2006 aa)    
Predicted Functional Partners:
Unc79
Unc-79 homolog.
   
 0.997
Scn1b
Sodium channel, voltage-gated, type I, beta.
    
 0.976
Scn2b
Sodium channel, voltage-gated, type II, beta.
   
 0.966
Scn3a
Sodium channel, voltage-gated, type III, alpha.
  
 
0.964
Scn4b
Sodium channel, type IV, beta.
    
 0.913
Scn9a
Sodium channel, voltage-gated, type IX, alpha.
  
  
0.858
Hcn4
Hyperpolarization-activated, cyclic nucleotide-gated K+ 4.
    
 0.848
Calhm1
Calcium homeostasis modulator 1.
     
 0.841
Wdr35
WD repeat domain 35.
    
 0.831
Ift122
Intraflagellar transport 122.
   
 0.825
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.