STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oma1OMA1 zinc metallopeptidase. (489 aa)    
Predicted Functional Partners:
ENSJJAP00000006743
annotation not available
    
 0.910
Icmt
Isoprenylcysteine carboxyl methyltransferase.
   
 0.910
Rce1
Ras converting CAAX endopeptidase 1.
    
 0.910
Opa1
OPA1, mitochondrial dynamin like GTPase.
    
 0.910
Fntb
Farnesyltransferase, CAAX box, beta.
     
 0.902
Fnta
Farnesyltransferase, CAAX box, alpha.
     
 0.901
Yme1l1
YME1-like 1 (S. cerevisiae).
  
 
 0.736
Mfn2
Mitofusin 2.
    
 0.730
Mfn1
Mitofusin 1.
    
 0.728
Clpb
ClpB caseinolytic peptidase B.
  
  
 0.723
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.