STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CcsCopper chaperone for superoxide dismutase. (274 aa)    
Predicted Functional Partners:
Atp7b
ATPase, Cu++ transporting, beta polypeptide.
  
 0.998
Atp7a
ATPase, Cu++ transporting, alpha polypeptide.
  
 0.998
Sod3
Superoxide dismutase 3, extracellular.
 
0.990
ENSJJAP00000001904
annotation not available
 
0.988
ENSJJAP00000009845
annotation not available
 
0.988
Sod2
Superoxide dismutase 2, mitochondrial.
  
 
 0.929
Gphn
Gephyrin.
    
  0.833
Txnrd1
Thioredoxin reductase 1.
    
 0.797
ENSJJAP00000014680
annotation not available
    
 0.797
Gsr
Glutathione reductase.
    
 0.797
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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