Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cd79a | Chga | ENSJJAP00000014541 | ENSJJAP00000009852 | CD79A antigen (immunoglobulin-associated alpha). | Chromogranin A. | 0.570 |
Cd79a | Tgfb1 | ENSJJAP00000014541 | ENSJJAP00000008774 | CD79A antigen (immunoglobulin-associated alpha). | Transforming growth factor, beta 1. | 0.568 |
Chga | Cd79a | ENSJJAP00000009852 | ENSJJAP00000014541 | Chromogranin A. | CD79A antigen (immunoglobulin-associated alpha). | 0.570 |
Chga | ENSJJAP00000019066 | ENSJJAP00000009852 | ENSJJAP00000019066 | Chromogranin A. | annotation not available | 0.550 |
Chga | Eno2 | ENSJJAP00000009852 | ENSJJAP00000020686 | Chromogranin A. | Enolase 2, gamma neuronal. | 0.560 |
Chga | Lgr5 | ENSJJAP00000009852 | ENSJJAP00000022968 | Chromogranin A. | Leucine rich repeat containing G protein coupled receptor 5. | 0.570 |
Chga | Scg2 | ENSJJAP00000009852 | ENSJJAP00000009081 | Chromogranin A. | Secretogranin II. | 0.684 |
Chga | Scg3 | ENSJJAP00000009852 | ENSJJAP00000011027 | Chromogranin A. | Secretogranin III. | 0.641 |
Chga | Sst | ENSJJAP00000009852 | ENSJJAP00000006452 | Chromogranin A. | Somatostatin. | 0.605 |
Chga | Syp | ENSJJAP00000009852 | ENSJJAP00000002112 | Chromogranin A. | Synaptophysin. | 0.576 |
Chga | Tgfb1 | ENSJJAP00000009852 | ENSJJAP00000008774 | Chromogranin A. | Transforming growth factor, beta 1. | 0.570 |
Chga | Tph1 | ENSJJAP00000009852 | ENSJJAP00000024198 | Chromogranin A. | Tryptophan hydroxylase 1. | 0.550 |
ENSJJAP00000019066 | Chga | ENSJJAP00000019066 | ENSJJAP00000009852 | annotation not available | Chromogranin A. | 0.550 |
ENSJJAP00000019066 | Sst | ENSJJAP00000019066 | ENSJJAP00000006452 | annotation not available | Somatostatin. | 0.570 |
ENSJJAP00000019066 | Tgfb1 | ENSJJAP00000019066 | ENSJJAP00000008774 | annotation not available | Transforming growth factor, beta 1. | 0.411 |
Eno2 | Chga | ENSJJAP00000020686 | ENSJJAP00000009852 | Enolase 2, gamma neuronal. | Chromogranin A. | 0.560 |
Eno2 | Syp | ENSJJAP00000020686 | ENSJJAP00000002112 | Enolase 2, gamma neuronal. | Synaptophysin. | 0.537 |
Lgr5 | Chga | ENSJJAP00000022968 | ENSJJAP00000009852 | Leucine rich repeat containing G protein coupled receptor 5. | Chromogranin A. | 0.570 |
Scg2 | Chga | ENSJJAP00000009081 | ENSJJAP00000009852 | Secretogranin II. | Chromogranin A. | 0.684 |
Scg2 | Scg3 | ENSJJAP00000009081 | ENSJJAP00000011027 | Secretogranin II. | Secretogranin III. | 0.599 |
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