STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dus4lDihydrouridine synthase 4-like (S. cerevisiae). (321 aa)    
Predicted Functional Partners:
Eprs
glutamyl-prolyl-tRNA synthetase.
  
 
 0.915
Bcap29
B cell receptor associated protein 29.
 
    
 0.868
ENSJJAP00000014903
annotation not available
  
  
 0.653
ENSJJAP00000021904
annotation not available
  
  
 0.653
Trmt61a
tRNA methyltransferase 61A.
   
  
 0.634
Pus3
Pseudouridine synthase 3.
  
 
 0.630
Mettl1
Methyltransferase like 1.
  
 
 0.630
Tsr3
TSR3 20S rRNA accumulation.
   
  
 0.623
Bcap31
B cell receptor associated protein 31.
 
    
 0.606
Wdr4
WD repeat domain 4.
   
 
 0.595
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.