STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
2210010C04RikRIKEN cDNA 2210010C04 gene. (247 aa)    
Predicted Functional Partners:
Ctrl
Chymotrypsin-like.
  
0.969
App
Amyloid beta (A4) precursor protein.
 
  
 0.956
Cpb1
Carboxypeptidase B1 (tissue).
 
 0.945
ENSJJAP00000024687
annotation not available
    
  0.938
Cel
Carboxyl ester lipase.
   
 
 0.931
Spink1
Serine peptidase inhibitor, Kazal type 1.
   
 0.884
Spint2
Serine protease inhibitor, Kunitz type 2.
    
  0.881
F2r
Coagulation factor II (thrombin) receptor.
    
 0.876
Ambp
Alpha 1 microglobulin/bikunin precursor.
   
 0.874
F2rl3
Coagulation factor II (thrombin) receptor-like 3.
    
  0.873
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.