STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asb10Ankyrin repeat and SOCS box-containing 10. (466 aa)    
Predicted Functional Partners:
Commd8
COMM domain containing 8.
   
  0.666
Nedd8
Neural precursor cell expressed, developmentally down-regulated gene 8.
    
  0.664
ENSJJAP00000003155
annotation not available
    
  0.644
ENSJJAP00000019903
annotation not available
    
 0.633
Pla2g4a
Phospholipase A2, group IVA (cytosolic, calcium-dependent).
    
 0.619
Cul5
Cullin 5.
    
 0.611
Commd10
COMM domain containing 10.
    
  0.607
Commd2
COMM domain containing 2.
    
  0.606
Ccdc22
Coiled-coil domain containing 22.
    
  0.597
Ift22
Intraflagellar transport 22.
    
 0.594
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.