STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ncbp2Nuclear cap binding protein subunit 2. (162 aa)    
Predicted Functional Partners:
Snrpd3
Small nuclear ribonucleoprotein D3.
   
 0.997
Srrt
Serrate RNA effector molecule homolog (Arabidopsis).
    
 0.996
Snrpd1
Small nuclear ribonucleoprotein D1.
   
 0.996
ENSJJAP00000002422
annotation not available
   
 0.995
ENSJJAP00000004524
annotation not available
   
0.995
Snrpd2
Small nuclear ribonucleoprotein D2.
   
 0.994
ENSJJAP00000003891
annotation not available
   
 0.992
Nelfe
Negative elongation factor complex member E, Rdbp.
    
 0.992
ENSJJAP00000022911
annotation not available
   
 0.992
Cdc40
Cell division cycle 40.
    
 0.990
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.