STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spata46Spermatogenesis associated 46. (204 aa)    
Predicted Functional Partners:
Mdm4
Transformed mouse 3T3 cell double minute 4.
    
   0.636
Gapvd1
GTPase activating protein and VPS9 domains 1.
    
   0.611
Snx24
Sorting nexing 24.
    
   0.585
Spaca1
Sperm acrosome associated 1.
      
 0.570
Ssmem1
Serine-rich single-pass membrane protein 1.
      
 0.570
Tm9sf3
Transmembrane 9 superfamily member 3.
      
 0.516
Spata16
Spermatogenesis associated 16.
   
  
 0.515
Agbl5
ATP/GTP binding protein-like 5.
      
 0.489
Spata20
Spermatogenesis associated 20.
      
 0.473
Hlcs
Holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase).
    
   0.463
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.