STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJJAP00000010643annotation not available (175 aa)    
Predicted Functional Partners:
Prpf19
pre-mRNA processing factor 19.
    
 0.815
Xab2
XPA binding protein 2.
    
 0.813
Snw1
SNW domain containing 1.
    
 0.809
ENSJJAP00000013890
annotation not available
   
 0.806
Macroh2a2
macroH2A.2 histone.
    
  0.792
Macroh2a1
macroH2A.1 histone.
    
  0.792
Nup88
Nucleoporin 88.
    
 0.788
Bud31
BUD31 homolog.
    
 0.785
Nup155
Nucleoporin 155.
   
 0.780
Crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
 0.779
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.