STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atp2b1ATPase, Ca++ transporting, plasma membrane 1. (1252 aa)    
Predicted Functional Partners:
Prkacb
Protein kinase, cAMP dependent, catalytic, beta.
   
 
 0.873
Prkaca
Protein kinase, cAMP dependent, catalytic, alpha.
   
 
 0.873
Atp2b4
ATPase, Ca++ transporting, plasma membrane 4.
  
 
 
0.869
Atp2b3
ATPase, Ca++ transporting, plasma membrane 3.
  
 
 
0.864
Atp2b2
ATPase, Ca++ transporting, plasma membrane 2.
  
 
 
0.862
Prkg1
Protein kinase, cGMP-dependent, type I.
  
 
 0.847
Prkg2
Protein kinase, cGMP-dependent, type II.
  
 
 0.847
Pln
Phospholamban.
    
 0.813
Atp2a1
ATPase, Ca++ transporting, cardiac muscle, fast twitch 1.
  
 
0.775
Atp2a2
ATPase, Ca++ transporting, cardiac muscle, slow twitch 2.
  
 
0.772
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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