STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Foxd2Forkhead box D2. (495 aa)    
Predicted Functional Partners:
Suox
Sulfite oxidase.
     
 0.776
Sgk3
Serum/glucocorticoid regulated kinase 3.
    
 0.733
ENSJJAP00000001274
annotation not available
 
 
    0.624
Smad4
SMAD family member 4.
    
 0.587
Tmem173
Transmembrane protein 173.
    
  0.587
Sirt1
Sirtuin 1.
    
 0.583
Crebbp
CREB binding protein.
    
 0.580
Cenpp
Centromere protein P.
    
 0.580
Ep300
E1A binding protein p300.
    
 0.580
Rfx1
Regulatory factor X, 1 (influences HLA class II expression).
    
 
 0.570
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.