STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snu13SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5). (128 aa)    
Predicted Functional Partners:
Nop58
NOP58 ribonucleoprotein.
   
 0.996
ENSJJAP00000000241
annotation not available
   
 0.994
ENSJJAP00000012458
annotation not available
   
 0.994
Rrp9
RRP9, small subunit (SSU) processome component, homolog (yeast).
   
 0.987
ENSJJAP00000000468
annotation not available
   
 0.986
ENSJJAP00000009188
annotation not available
   
 0.986
Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.985
Rps5
Ribosomal protein S5.
  
 0.984
Utp4
UTP4 small subunit processome component.
   
 0.984
Utp18
UTP18 small subunit processome component.
   
 0.983
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.