STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ttc19Tetratricopeptide repeat domain 19. (252 aa)    
Predicted Functional Partners:
Leo1
Leo1, Paf1/RNA polymerase II complex component.
    
 0.937
Tep1
Telomerase associated protein 1.
   
 0.776
Csnk2a1
Casein kinase 2, alpha 1 polypeptide.
    
 0.707
Cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component.
    
 0.702
ENSJJAP00000006168
annotation not available
    
 0.700
Lypd6b
LY6/PLAUR domain containing 6B.
    
 0.700
Kif5a
Kinesin family member 5A.
    
 0.700
Lypd6
LY6/PLAUR domain containing 6.
    
 0.700
ENSJJAP00000021234
annotation not available
    
 0.700
Cdc16
CDC16 cell division cycle 16.
    
 0.699
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.