STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmc8Transmembrane channel-like gene family 8. (728 aa)    
Predicted Functional Partners:
ENSJJAP00000011957
annotation not available
   
 0.784
Wdr90
WD repeat domain 90.
    
 0.620
Ptk7
PTK7 protein tyrosine kinase 7.
    
  0.620
Wnt11
Wingless-type MMTV integration site family, member 11.
   
 
 0.618
ENSJJAP00000005757
annotation not available
    
 0.614
ENSJJAP00000012494
annotation not available
    
 0.613
Idua
Iduronidase, alpha-L.
    
 
 0.599
Slf1
SMC5-SMC6 complex localization factor 1.
   
 0.592
Mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.591
ENSJJAP00000003817
annotation not available
    
 0.585
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.