STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Wdr81WD repeat domain 81. (1938 aa)    
Predicted Functional Partners:
Becn1
Beclin 1, autophagy related.
    
 
 0.936
Rbsn
Rabenosyn, RAB effector.
     
 0.762
Atp6v0c
ATPase, H+ transporting, lysosomal V0 subunit C.
     
 0.750
Smpd2
Sphingomyelin phosphodiesterase 2, neutral.
     
 0.733
Vps18
VPS18 CORVET/HOPS core subunit.
   
  
 0.682
Atp6v0b
ATPase, H+ transporting, lysosomal V0 subunit B.
     
 0.678
Vps45
Vacuolar protein sorting 45.
   
 
  0.668
ENSJJAP00000011139
annotation not available
   
 
 0.613
ENSJJAP00000019486
annotation not available
   
 
 0.613
Tnfrsf25
Tumor necrosis factor receptor superfamily, member 25.
    
 0.597
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.