STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chmp5Charged multivesicular body protein 5. (213 aa)    
Predicted Functional Partners:
Vta1
Vesicle (multivesicular body) trafficking 1.
   
 0.998
Chmp2a
Charged multivesicular body protein 2A.
   
 0.996
Chmp4c
Charged multivesicular body protein 4C.
  
 0.995
Chmp4b
Charged multivesicular body protein 4B.
  
0.994
2610002M06Rik
RIKEN cDNA 2610002M06 gene.
   
 0.992
Chmp1a
Charged multivesicular body protein 1A.
   
 0.992
ENSJJAP00000007751
annotation not available
   
 0.991
Ist1
Increased sodium tolerance 1 homolog (yeast).
    
 
 0.982
ENSJJAP00000014475
annotation not available
   
 0.977
ENSJJAP00000024827
annotation not available
   
 0.977
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.