STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PtprhProtein tyrosine phosphatase, receptor type, H. (933 aa)    
Predicted Functional Partners:
ENSJJAP00000003817
annotation not available
    
 0.968
Met
Met proto-oncogene.
    
 0.968
Tnr
Tenascin R.
    
 
0.850
Tnc
Tenascin C.
    
 
0.850
Tnn
Tenascin N.
    
 
0.850
Ctnnb1
Catenin (cadherin associated protein), beta 1.
    
 0.773
Jup
Junction plakoglobin.
    
 0.696
ENSJJAP00000005804
annotation not available
    
 0.692
Arvcf
Armadillo repeat gene deleted in velocardiofacial syndrome.
    
 0.692
Flt3
FMS-like tyrosine kinase 3.
   
 0.616
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.